| Comparative RNA Web Site
… disseminates information about RNA structure and evolution that has been determined using comparative sequence analysis - [e] Functional RNA Project - Bioinformatics Tools and Databases
… is the portal site for bioinformatics tools and databases spcialized for functional RNAs - [e] Genomic tRNA Database
… contains tRNA gene predictions made by the program tRNAscan-SE on complete or nearly complete genomes - [e] miRBase
The miRBase database is a searchable database of published miRNA sequences and annotation - [e] Modomics
A database of RNA modification pathways. Genesilico - [e] Nucleic Acid Database
NDB is to assemble and distribute structural information about nucleic acids - [e] Rfam
The Rfam database is a collection of RNA families, each represented by multiple sequence alignments, consensus secondary structures and covariance models. Sanger Institute - [e] Ribosomal Database Project
RDP provides ribosome related data and services to the scientific community, including online data analysis and aligned and annotated Bacterial and Archaeal small-subunit 16S rRNA sequences. Michigan State University - [e] RNA Editing Web Site
… is a site for dissemination of information on all the various types of RNA editing - [e] RNA Frabase
An engine with database to search the three-dimensional fragments within 3D RNA structures using as an input the sequence(s) and / or secondary structure(s) given in the dot-bracket notation - [e] RNA polymerase
Reference pathway (KO). KEGG, Japan - [e] SILVA rRNA Database Project
A comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data, free for academic use - [e] | 
